Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
KIRP rs61948107 chr13:46997934 T/C 2.34E-10 288 25.02 30.2 16.5 KM Plot
KIRP rs61948125 chr13:47002262 C/A 4.91E-7 289 24.8 37.87 23.23 KM Plot
KIRP rs61948127 chr13:47005193 T/C 6.27E-7 287 24.73 34.38 23.23 KM Plot
KIRP rs61948136 chr13:47028989 C/T 5.83E-7 288 24.8 34.38 23.23 KM Plot
KIRP rs61949223 chr13:46927960 G/C 4.73E-7 289 24.73 34.38 23.23 KM Plot
KIRP rs61949224 chr13:46934957 C/T 4.93E-7 288 24.67 34.38 23.23 KM Plot
KIRP rs61949228 chr13:46937952 T/C 4.73E-7 289 24.73 34.38 23.23 KM Plot
KIRP rs61949763 chr13:45007475 T/C 7.35E-8 287 26.57 22.47 9.72 KM Plot
KIRP rs61949795 chr13:45030136 G/A 1.34E-11 286 26 23.63 6.17 KM Plot
KIRP rs61949803 chr13:45048498 C/G 1.78E-11 283 26.15 23.63 6.17 KM Plot
KIRP rs62019675 chr16:8715287 C/A 5.14E-5 289 5.72 32.93 25.57 KM Plot
KIRP rs620291 chr11:113113858 C/G 1.92E-6 289 15.15 27.47 24.48 KM Plot
KIRP rs62052226 chr16:90022137 T/C 2.09E-8 281 24.67 34.82 5.95 KM Plot
KIRP rs62052239 chr16:90024866 C/T 1.97E-8 282 24.73 34.82 5.95 KM Plot
KIRP rs62052240 chr16:90025135 C/T 1.97E-8 282 24.73 34.82 5.95 KM Plot